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It Helps to be Flexible: Supple WIN Compounds Could Cure the Common Cold
A wiggling WIN antiviral compound (which received its name from the former Sterling-Winthrop company) could be the answer for fighting the common cold, says a team of Purdue University (West Lafayette, IN) researchers.
The rhinovirus-one cause for the common cold-has two main properties that make it difficult to stop. First, the virus can go incognito by subtly changing its surface structure and making it undetectable by the body’s immune system. Second, after the virus enters the cell, it opens up a trap door to unleash RNA that instructs the cell to produce more rhinovirus particles.
A small, cigar-shaped cavity located in the folds of the VP-1 protein on the viral shell helps guide these changes. Filling this crevice prevents the virus from shape shifting and is the key to curing the cold, say the Purdue researchers. “What we’d like to do is find something that will stabilize these VP-1 proteins so the trap door can’t open, and WIN compounds are potential compounds for the job,” said Carol B. Post, professor at Purdue, in a press release.
By using computer simulations of the molecule’s structure (for full video), the team has discovered that the WIN compound’s flexible nature allows it to wiggle into this gap. Once inside the cavity, the molecule affects the VP-1 protein’s rigidity, thereby deactivating the virus. Said Post, “In essence, the compounds can get tangled up in the protein so it can’t move enough to let the RNA out. One reason WIN compounds are promising is that they are very good at getting to the spot where they can tangle up the protein effectively, which turns out to be a tricky business.”
Researchers speculate the stiffness may also inhibit the virus from opening its trap door because, just as people don’t like exercising after a big meal, “having a WIN compound in its cavity may be the VP-1 protein’s equivalent of having an overly full stomach,” noted Post.